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dsh-bioinf-verify

Model Inference Updated 2026.09.01

Run the following command in DeepSeek Harness:

dsh plugin install gsh150801/dsh-bioinf-verify

Paste the following prompt into your AI chat to install this plugin:

Install dsh-bioinf-verify in DeepSeek Harness from https://github.com/gsh150801/dsh-bioinf-verify by running dsh plugin install gsh150801/dsh-bioinf-verify .

About this plugin

The most dangerous failures in AI-generated biomedical reports are rarely outright fabrications. More often they are subtle: a DOI or PMID that matches no record, a cited URL that returns 404, or a real DOI whose actual content is nothing like what the report claims. dsh-bioinf-verify turns that class of error into a deterministic catch.

Verification runs on two tracks. Existence, retraction, and title-matching checks hit authoritative registries directly — Crossref, PubMed, ClimateTrials.gov, UniProt, GEO, SRA, PatentsView — so the answer is a registry lookup, not a model guess. URL reachability is checked via raw HTTP with soft-404 heuristics. The one place an LLM enters is semantic consistency: a temperature-0 entailment step that compares two verbatim source passages and nothing else. A whole-report workflow decomposes the text into claims, runs per-claim multi-aspect checks against a durable, crash-recoverable JSON ledger, and finishes with an inline-annotated original plus a summary verification report.

Built for biomedical researchers, lab scientists, and science writers who need every citation, link, and semantic claim in a report to survive independent scrutiny.

Use Cases

  • Verify existence and retraction status of every DOI and PMID in an AI-drafted literature review
  • Confirm cited URLs are live, catching soft-404s and dead links before publication
  • Match each report claim against registry source text to catch misattributed findings

Best For

  • Biomedical researchers authoring AI-assisted literature reviews
  • Lab scientists preparing clinical trial reports and dataset descriptions
  • Science writers who need every citation to survive independent scrutiny