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dsh-synomega

Model Inference Updated 2026.08.25

Run the following command in DeepSeek Harness:

dsh plugin install zbc0315/dsh-synomega

Paste the following prompt into your AI chat to install this plugin:

Install the plugin by running dsh plugin install zbc0315/dsh-synomega in DeepSeek Harness (source: https://github.com/zbc0315/dsh-synomega).

About this plugin

In AI-assisted chemistry, the most fragile step is rarely the model itself but the act of handing a structure to it. A SMILES string with one substituent shifted by a ring position is an entirely different compound, yet retrosynthesis, route planning, and synthesizability scoring all demand constant switching between text and structure. dsh-synomega embeds five SynOmega model tools directly into the DeepSeek Harness conversation: ask how to make X and receive a step-scored route tree down to purchasable building blocks; ask what a reactant pool can form and get a depth-organized evolution network. After a one-time local download everything runs on your machine with no API key and no remote inference.

The plugin ships with a Ketcher structure editor so you can draw a molecule into the conversation instead of typing SMILES by hand, eliminating transcription risk. In the browser, results render as cards: each candidate reaction shows reactants to product with its score, routes appear as trees with per-step scores on the edges and unpurchasable starting materials highlighted. All rendering is done by locally bundled smiles-drawer and d3-hierarchy, works fully offline, and reopening an old conversation reproduces the same picture.

Best suited for researchers and educators in medicinal synthesis, natural-product total synthesis, or reaction-condition optimization who need a local, reproducible, network-independent setup. All inference stays on a single machine, results are reproducible, and no structures leave the host.

Screenshots

Use Cases

  • Plan a step-scored synthesis route for a target molecule down to purchasable building blocks
  • Predict ranked products from a given set of reactants
  • Score candidate molecules by synthesizability to quickly triage difficulty

Best For

  • Medicinal and natural-product total synthesis researchers
  • Organic chemistry labs requiring offline, reproducible tooling
  • Chemistry educators demonstrating reaction reasoning to students