Pathology Slice Analysis

Problem

Pathology slide AI diagnosis often gets stuck in fragmented steps: uploading WSI files to COS, creating file-record callbacks, creating WSI records, then polling diagnosis status. Manually chaining these calls risks missing parameters, malformed COS paths, or unclear recovery after a 401 token error.

How It Works

The skill runs a fixed six-step flow and prints machine-readable status lines such as STEP_STATUS|step=....
- Authentication: reads PATHOLOGY_USERNAME and PATHOLOGY_PASSWORD; if a valid token already exists, it prints skipped.
- Upload and records: fetches temporary COS credentials, uploads WSI files under SLIDES/chunked_uploads/{YYYYMMDD}/{organization}/{file MD5}/{filename}{extension}, then creates the file-record callback and WSI record.
- Diagnosis lookup: waits 30 seconds by default, queries the diagnosis status for the returned slide_id, and outputs modified_ai_diagnosis_result_map.value.

Boundaries

It targets an internal environment with an existing account, COS permissions, and pathology AI service access. Users must select a diagnosis type: 6 for general tissue slices or 14 for digestive biopsy AI. Any 401 response should trigger re-login, and statuses other than 4 should be retried after the suggested delay.